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Alignment of biomedical ontologies using life science literature

... ontologies based on life science literature. We propose a basic algorithm as well as extensions that take the structure of the ...

Publication - cat - 04/17/2013 - 11:49 - 0 comments - 1 attachment

A Framework for Aligning Ontologies

... the ontologies need to be aligned. Currently, there exist a number of systems that support users in aligning ontologies, but not many ... have been performed. In this paper we present a general framework for aligning ontologies where different alignment ... we exemplify the use of the framework by describing a system (SAMBO) that is developed according to this framework. Within this ...

Publication - cat - 04/17/2013 - 11:49 - 0 comments - 1 attachment

Oasis: A Mapping and Integration Framework for Biomedical Ontologies

... often overlap with other entities in other ontologies, a mapping between two corresponding terms is required and becoming the key to the integration of heterogeneous ontologies. Based on a previously developed schema matching algorithm, this paper presents a ...

Publication - cat - 04/16/2013 - 09:05 - 0 comments - 0 attachments

Using annotations from controlled vocabularies to find meaningful associations

... Life Science Link) methodology that provides users with a set of tools to explore the rich Web of interconnected and annotated objects ... and to identify meaningful associations. Consider a physical link between objects in two repositories, where each of the objects ...

Publication - hartung - 04/15/2013 - 23:05 - 0 comments - 0 attachments