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Linking the Gene Ontology to other biomedical ontologies

... Bodenreider, O.; Burgun, A. Author:  ... O Burgun, A Year:  ...

Publication - hartung - 04/17/2013 - 12:05 - 0 comments - 0 attachments

NLM Anatomical Ontology Alignment System Results of the 2006 Ontology Alignment Contest

... 116.03 KB An ontology is a formal representation of a domain modeling the entities in the domain and their relations. When a domain is represented by multiple ontologies, there is need for creating ...

Publication - hartung - 04/17/2013 - 02:49 - 0 comments - 1 attachment

Of mice and men: Aligning mouse and human anatomies

... on the alignment between mouse and human anatomies, a critical resource for comparative science as diseases in mice are used as ... to aligning ontologies. One is fully automatic, based on a combination of lexical and structural similarity; the other is manual. The ...

Publication - hartung - 04/17/2013 - 02:16 - 0 comments - 1 attachment

Aligning Multiple Anatomical Ontologies through a Reference

... from the two direct alignments of these ontologies to a reference ontology. The three anatomical ontologies under investigation are ... of Anatomy (FMA). Methods: The direct alignment employs a combination of lexical and structural similarity. The indirect align-ment ...

Publication - hartung - 04/17/2013 - 02:16 - 0 comments - 1 attachment

Alignment of the UMLS semantic network with BioTop: methodology and assessment

... upon strict ontological principles, using OWL DL as a formal representation language, which has become standard in the semantic ... for the resources annotated or categorized with the SN, a mapping ontology was developed aligning the SN with BioTop. METHODS: The ...

Publication - cat - 04/15/2013 - 21:27 - 0 comments - 0 attachments