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Why It Is Time for Yet Another Schema Evolution Benchmark

... heterogeneous data, managing several data models in one integrated backend. Yet one of the many challenges these systems face is evolution management. In our demonstration, we present our prototype implementation of a tool called ...

Publication - cat - 04/17/2022 - 19:21 - 0 comments - 0 attachments

Remaining in Control of the Impact of Schema Evolution in NoSQL Databases

... naturally alongside the application code. Especially in agile development, new application releases are deployed frequently. ... the migration of versioned legacy data which is persisted in the cloud-hosted production database. We address this schema evolution ...

Publication - cat - 04/17/2022 - 18:58 - 0 comments - 0 attachments

REX - a tool for discovering evolution trends in ontology regions

... Proc. 10th Intl. Conference on Data Integration in the Life Sciences (DILS) Citations ... of new insights and knowledge affects specific portions in ontologies and thus leads to their adaptation. Therefore, it is valuable to ...

Publication - cat - 01/23/2018 - 14:35 - 0 comments - 0 attachments

Semi-Automatic Adaptation of Mappings between Life Science Ontologies

... Proc. 9th Intl. Conference on Data Integration in the Life Sciences (DILS) Citations ... We propose two approaches for tackling this problem in a largely automatic way: (1) a composition-based adaptation relying on ...

Publication - cat - 01/23/2018 - 14:33 - 0 comments - 0 attachments

Composition Methods for Link Discovery

... Proc. of 15. GI-Fachtagung für Datenbanksysteme in Business, Technologie und Web (BTW) ...

Publication - cat - 01/23/2018 - 14:29 - 0 comments - 0 attachments

How do computed ontology mappings evolve? - A case study for life science ontologies

... to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the ... attention albeit ontologies change continuously especially in the life sciences. We therefore analyze how mappings between popular life ...

Publication - hartung - 01/23/2018 - 14:25 - 0 comments - 0 attachments

How do computed ontology mappings evolve? - A case study for life science ontologies

... to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the ... attention albeit ontologies change continuously especially in the life sciences. We therefore analyze how mappings between popular life ...

Publication - cat - 01/23/2018 - 14:23 - 0 comments - 0 attachments

COnto-Diff : Generation of Complex Evolution Mappings for Life Science Ontologies

... Such a Diff supports the synchronization of changes in collaborative curation, the adaptation of dependent data such as ... entire subgraphs. The proposed algorithm is customizable in different ways to meet the requirements of diverse ontologies and ... be used for version management and annotation migration in collaborative curation. (Diff, Journal, Ontology evolution, Research ...

Publication - hartung - 01/22/2018 - 09:28 - 0 comments - 0 attachments

On Matching Large Life Science Ontologies in Parallel

... Data Integration in the Life Sciences (DILS) URL:  ... for parallel matching on multiple compute nodes. In particular, we consider inter-matcher and intra-matcher parallelism as well ...

Publication - hartung - 07/26/2016 - 16:40 - 0 comments - 0 attachments

Discovering Evolving Regions in Life Science Ontologies

... Data Integration in the Life Sciences (DILS) URL:  ... - 9 Ontologies are heavily used in life sciences and evolve continuously to incorporate new or changed ...

Publication - hartung - 04/17/2013 - 12:27 - 0 comments - 0 attachments

An efficient and scalable algorithm for segmented alignment of ontologies of arbitrary size

... ontologies. Here we assume, an ontology is typically given in RDF (Resource Description Framework) or OWL (Web Ontology Language) and can ... ontologies, where N denotes the average number of nodes in each ontology. Our proposed algorithm called Anchor-Flood algorithm, ...

Publication - george - 04/17/2013 - 04:38 - 0 comments - 0 attachments

GOMMA: A Component-based Infrastructure for managing and analyzing Life Science Ontologies and their Evolution

... describe entities of domains, such as genes and proteins in life sciences. Their increasing size and the high frequency of updates resulting in a large set of ontology versions necessitates efficient management and ... (Compose, Diff, Journal, Mapping evolution, OA in the Life Sciences, Ontology evolution, Research paper, Versioning) ...

Publication - hartung - 04/16/2013 - 23:05 - 0 comments - 0 attachments

E ffective Mapping Composition for Biomedical Ontologies

... Semantic Interoperability in Medical Informatics @ ESWC 2012 ... promising for highly interconnected ontologies such as in the life science domain. There may be many ontologies that can be used for ...

Publication - hartung - 04/16/2013 - 22:49 - 0 comments - 1 attachment

Scalable Architecture and Query Optimization for Transaction-time DBs with Evolving Schemas

... causes major usability and scalability problems in preservation,retrieval and querying of databases with intense evolution ... hundreds of schema versions.This scenarios are common in web information systems and scientific databases that frequently accumulate ...

Publication - krlis1337 - 04/16/2013 - 08:05 - 0 comments - 0 attachments

Mapping Composition for Matching Large Life Science Ontologies

... need to interrelate different life science ontologies in order to facilitate data integration or semantic data analysis. Ontology ... linguistic and structural similarity of their concepts. In this paper we investigate an indirect computation of ontology mappings that ...

Publication - hartung - 04/16/2013 - 02:05 - 0 comments - 0 attachments