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How do computed ontology mappings evolve? - A case study for life science ontologies

... to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the ... attention albeit ontologies change continuously especially in the life sciences. We therefore analyze how mappings between popular life ...

Publication - hartung - 01/23/2018 - 14:25 - 0 comments - 0 attachments

On Matching Large Life Science Ontologies in Parallel

... Data Integration in the Life Sciences (DILS) URL:  ... for parallel matching on multiple compute nodes. In particular, we consider inter-matcher and intra-matcher parallelism as well ...

Publication - hartung - 07/26/2016 - 16:40 - 0 comments - 0 attachments

GOMMA: A Component-based Infrastructure for managing and analyzing Life Science Ontologies and their Evolution

... describe entities of domains, such as genes and proteins in life sciences. Their increasing size and the high frequency of updates resulting in a large set of ontology versions necessitates efficient management and ... (Compose, Diff, Journal, Mapping evolution, OA in the Life Sciences, Ontology evolution, Research paper, Versioning) ...

Publication - hartung - 04/16/2013 - 23:05 - 0 comments - 0 attachments

E ffective Mapping Composition for Biomedical Ontologies

... Semantic Interoperability in Medical Informatics @ ESWC 2012 ... promising for highly interconnected ontologies such as in the life science domain. There may be many ontologies that can be used for ...

Publication - hartung - 04/16/2013 - 22:49 - 0 comments - 1 attachment

Mapping Composition for Matching Large Life Science Ontologies

... need to interrelate different life science ontologies in order to facilitate data integration or semantic data analysis. Ontology ... linguistic and structural similarity of their concepts. In this paper we investigate an indirect computation of ontology mappings that ...

Publication - hartung - 04/16/2013 - 02:05 - 0 comments - 0 attachments

An evolution-based approach for assessing ontology mappings - A case study in the life sciences

... Proc. of 13. GI-Fachtagung für Datenbanksysteme in Business, Technologie und Web (BTW) ... and more robust ontology mappings. The approach is generic in that it can be applied independently from the utilized match technique. We ...

Publication - hartung - 04/16/2013 - 00:16 - 0 comments - 1 attachment

Estimating the Quality of Ontology-Based Annotations by Considering Evolutionary Changes

... 6th Intl. Workshop on Data Integration in the Life Sciences (DILS) URL:  ... object properties. Such annotation mappings are utilized in different applications and analysis studies whose results strongly depend on ...

Publication - hartung - 04/15/2013 - 23:38 - 0 comments - 0 attachments