... These ontology-based mappings and annotations are used in many applications and analysis tasks. Since biomedical ontologies are ... approaches to keep ontology-based mappings up-to-date in the presence of evolving ontologies. In this article, we survey current ...
Publication - cat - 01/23/2018 - 14:38 - 0 comments - 0 attachments
... Proc. 9th Intl. Conference on Data Integration in the Life Sciences (DILS) Citations ... We propose two approaches for tackling this problem in a largely automatic way: (1) a composition-based adaptation relying on ...
Publication - cat - 01/23/2018 - 14:33 - 0 comments - 0 attachments
... Proc. of 15. GI-Fachtagung für Datenbanksysteme in Business, Technologie und Web (BTW) ...
Publication - cat - 01/23/2018 - 14:29 - 0 comments - 0 attachments
... to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the ... attention albeit ontologies change continuously especially in the life sciences. We therefore analyze how mappings between popular life ...
Publication - hartung - 01/23/2018 - 14:25 - 0 comments - 0 attachments
... to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the ... attention albeit ontologies change continuously especially in the life sciences. We therefore analyze how mappings between popular life ...
Publication - cat - 01/23/2018 - 14:23 - 0 comments - 0 attachments
... Such a Diff supports the synchronization of changes in collaborative curation, the adaptation of dependent data such as ... entire subgraphs. The proposed algorithm is customizable in different ways to meet the requirements of diverse ontologies and ... be used for version management and annotation migration in collaborative curation. (Diff, Journal, Ontology evolution, Research ...
Publication - hartung - 01/22/2018 - 09:28 - 0 comments - 0 attachments
... Data Integration in the Life Science (DILS) Citations ... terminologies and ontologies is of high importance in the life sciences to enhance semantic interoperability, information ... tools to automatically determine possible annotations. In this study, we comparatively evaluate the quality of two such tools, cTAKES ...
Publication - cat - 01/21/2018 - 12:06 - 0 comments - 0 attachments
... with concepts of standardized vocabularies and ontologies. In the medical domain, many documents are not annotated at all and manual ... a reuse-based annotation approach that clusters items in medical documents according to verified ontology-based annotations. We ...
Publication - cat - 01/21/2018 - 12:06 - 0 comments - 0 attachments
... ontologies from other areas. It could thus participate in all OAEI tracks running on the SEALS platform. GOMMA supports several methods for efficiently matching large ontologies in particular parallel matching on multiple cores or machines, reducing the ...
Publication - cat - 01/21/2018 - 12:06 - 0 comments - 1 attachment
... Motivation: Ontologies are used in the annotation and analysis of biological data. As knowledge accumulates, ... enrichment analyses that describe experimental data in terms of ontological groupings. Here we investigate to what degree ...
Publication - cat - 01/21/2018 - 12:06 - 0 comments - 0 attachments
... Data Integration in the Life Sciences (DILS) Citations ... clinical trials. It is crucial to harmonize medical forms in order to improve interoperability and data integration between medical ...
Publication - cat - 01/21/2018 - 12:05 - 0 comments - 0 attachments
... Data Integration in the Life Sciences (DILS) URL: ... for parallel matching on multiple compute nodes. In particular, we consider inter-matcher and intra-matcher parallelism as well ...
Publication - hartung - 07/26/2016 - 16:40 - 0 comments - 0 attachments
... Data Integration in the Life Sciences (DILS) URL: ... - 9 Ontologies are heavily used in life sciences and evolve continuously to incorporate new or changed ...
Publication - hartung - 04/17/2013 - 12:27 - 0 comments - 0 attachments
... OWL. COMA++ includes new approaches for ontology matching, in particular the utilization of shared taxonomies. Furthermore, different ...
Publication - Anonymous - 04/17/2013 - 11:16 - 0 comments - 1 attachment
... between elements of two schemas. It is needed in many database applications, such as integration of web data sources, data ... matching system as a platform to combine multiple matchers in a flexible way. We provide a large spectrum of individual matchers, in ...
Publication - cat - 04/17/2013 - 10:49 - 0 comments - 1 attachment
... KB Schema matching is a critical step in many applications, such as XML message mapping, data warehouse loading, and schema integration. In this paper, we investigate algorithms for generic schema matching, ...
Publication - admin - 04/17/2013 - 10:49 - 0 comments - 1 attachment
... Proc. of Data Integration in the Life Sciences (DILS), 2007 URL: ... 188.63 KB Ontologies are heavily used in life sciences so that there is increasing value to match different ...
Publication - hartung - 04/17/2013 - 02:49 - 0 comments - 1 attachment
... Data Integration in the Life Sciences (DILS) 2008 URL: ... KB Ontologies are heavily developed and used in life sciences and undergo continuous changes. However, the evolution of ...
Publication - hartung - 04/17/2013 - 02:38 - 0 comments - 1 attachment
... of ontologies due to their increasing use and size, e.g. in e-business, web and life science appli-cations. Unfortunately, correctly and ... quality or/and high efficiency for large-scale matching. In addition to describing some recent matchers utilizing instance and usage ...
Publication - cat - 04/17/2013 - 02:16 - 0 comments - 0 attachments
... websites and are heavily used to find relevant websites in a particular domain of interest. Mappings between different web directories ...
Publication - massmann - 04/17/2013 - 01:49 - 0 comments - 1 attachment
... of an ontology which users can interactively analyze in multiple ways. Availability and Implementation: CODEX is available under ... and is supported by all major browsers. It is implemented in Java based on Google Web Toolkit technology. Additionally, users can access ...
Publication - hartung - 04/16/2013 - 23:05 - 0 comments - 0 attachments
... describe entities of domains, such as genes and proteins in life sciences. Their increasing size and the high frequency of updates resulting in a large set of ontology versions necessitates efficient management and ... (Compose, Diff, Journal, Mapping evolution, OA in the Life Sciences, Ontology evolution, Research paper, Versioning) ...
Publication - hartung - 04/16/2013 - 23:05 - 0 comments - 0 attachments
... evolution, an area which has recently gained much interest in both research and practice. (Schema Evolution, Sigmod Record, Survey / ...
Publication - admin - 04/16/2013 - 22:49 - 0 comments - 1 attachment
... Semantic Interoperability in Medical Informatics @ ESWC 2012 ... promising for highly interconnected ontologies such as in the life science domain. There may be many ontologies that can be used for ...
Publication - hartung - 04/16/2013 - 22:49 - 0 comments - 1 attachment
... 191.63 KB Schema matching is a basic problem in many database application domains, such as data integration, Ebusiness, data warehousing, and semantic query processing. In current implementations, schema matching is typically performed manually, ...
Publication - cat - 04/16/2013 - 22:16 - 0 comments - 1 attachment
