... These ontology-based mappings and annotations are used in many applications and analysis tasks. Since biomedical ontologies are ... approaches to keep ontology-based mappings up-to-date in the presence of evolving ontologies. In this article, we survey current ...
Publication - cat - 01/23/2018 - 14:38 - 0 comments - 0 attachments
... Proc. 9th Intl. Conference on Data Integration in the Life Sciences (DILS) Citations ... We propose two approaches for tackling this problem in a largely automatic way: (1) a composition-based adaptation relying on ...
Publication - cat - 01/23/2018 - 14:33 - 0 comments - 0 attachments
... to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the ... attention albeit ontologies change continuously especially in the life sciences. We therefore analyze how mappings between popular life ...
Publication - hartung - 01/23/2018 - 14:25 - 0 comments - 0 attachments
... to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the ... attention albeit ontologies change continuously especially in the life sciences. We therefore analyze how mappings between popular life ...
Publication - cat - 01/23/2018 - 14:23 - 0 comments - 0 attachments
... Such a Diff supports the synchronization of changes in collaborative curation, the adaptation of dependent data such as ... entire subgraphs. The proposed algorithm is customizable in different ways to meet the requirements of diverse ontologies and ... be used for version management and annotation migration in collaborative curation. (Diff, Journal, Ontology evolution, Research ...
Publication - hartung - 01/22/2018 - 09:28 - 0 comments - 0 attachments
... Motivation: Ontologies are used in the annotation and analysis of biological data. As knowledge accumulates, ... enrichment analyses that describe experimental data in terms of ontological groupings. Here we investigate to what degree ...
Publication - cat - 01/21/2018 - 12:06 - 0 comments - 0 attachments
... Data Integration in the Life Sciences (DILS) URL: ... - 9 Ontologies are heavily used in life sciences and evolve continuously to incorporate new or changed ...
Publication - hartung - 04/17/2013 - 12:27 - 0 comments - 0 attachments
... of an ontology which users can interactively analyze in multiple ways. Availability and Implementation: CODEX is available under ... and is supported by all major browsers. It is implemented in Java based on Google Web Toolkit technology. Additionally, users can access ...
Publication - hartung - 04/16/2013 - 23:05 - 0 comments - 0 attachments
... describe entities of domains, such as genes and proteins in life sciences. Their increasing size and the high frequency of updates resulting in a large set of ontology versions necessitates efficient management and ... (Compose, Diff, Journal, Mapping evolution, OA in the Life Sciences, Ontology evolution, Research paper, Versioning) ...
Publication - hartung - 04/16/2013 - 23:05 - 0 comments - 0 attachments
... evolution, an area which has recently gained much interest in both research and practice. (Schema Evolution, Sigmod Record, Survey / ...
Publication - admin - 04/16/2013 - 22:49 - 0 comments - 1 attachment
... Bonifati and Rahm provides an overview of the ways in which the schema and ontology matching and mapping tools have addressed the ...
Publication - cat - 04/16/2013 - 11:49 - 0 comments - 0 attachments
... entire subgraphs. The proposed algorithm is customizable in different ways to meet the requirements of diverse ontologies and ...
Publication - cat - 04/16/2013 - 08:38 - 0 comments - 1 attachment
Authors: Hartung, M.; Terwilliger, J.; Rahm, E. Author: Hartung, M ...
Publication - hartung - 04/16/2013 - 02:05 - 0 comments - 0 attachments
... Ontologies have become very popular in life sciences and other domains. They mostly undergo continuous changes and ... studies do not consider the ontology changes reflected in different versions but typically limit themselves to a specific ontology ...
Publication - hartung - 04/16/2013 - 00:38 - 0 comments - 0 attachments
... Proc. of 13. GI-Fachtagung für Datenbanksysteme in Business, Technologie und Web (BTW) ... and more robust ontology mappings. The approach is generic in that it can be applied independently from the utilized match technique. We ...
Publication - hartung - 04/16/2013 - 00:16 - 0 comments - 1 attachment
... usually show a high degree of heterogeneity and change in their metadata. We propose a platform for collaborative management and ...
Publication - hartung - 04/16/2013 - 00:05 - 0 comments - 0 attachments
... 6th Intl. Workshop on Data Integration in the Life Sciences (DILS) URL: ... object properties. Such annotation mappings are utilized in different applications and analysis studies whose results strongly depend on ...
Publication - hartung - 04/15/2013 - 23:38 - 0 comments - 0 attachments
... Numerous ontologies have recently been developed in life sciences to support a consistent annotation of biological objects, such ... web interface to explore information about changes in current life science ontologies. It is available at ...
Publication - hartung - 04/15/2013 - 23:27 - 0 comments - 1 attachment
